Ignore alsa mixer. Kodi doesn't use alsa for audio (it uses openmax).
Volume on analogue does work, so it's possible you have custom settings that are affecting it. A debug log may be useful.
But to start with I'd suggest using the "reset settings to default" option in the system/audio settings page, and just change the output device to analogue.
If that doesn't work then renaming /storage/.kodi to /storage/.kodi_back and restarting kodi will start from completely clean settings.
You can then set audio output to analogue and see if it's any different. If not you can rename back to .kodi to get back to your original settings.